PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1113s0006.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 142aa    MW: 15613.3 Da    PI: 8.4384
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1113s0006.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.97.9e-211767356
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                         y+GVr+++ +g+++AeIrd   n++  r++lg+f+ta eAa+a+++a+ +++g+
  Kalax.1113s0006.1.p 17 YRGVRRRP-WGKYAAEIRDS--NNQGVRVWLGTFDTALEAARAYDQAAYNMRGA 67
                         9*******.**********4..2345*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.841674IPR001471AP2/ERF domain
PfamPF008473.7E-151666IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-311676IPR001471AP2/ERF domain
SMARTSM003803.7E-321680IPR001471AP2/ERF domain
PRINTSPR003675.9E-111728IPR001471AP2/ERF domain
SuperFamilySSF541712.81E-221775IPR016177DNA-binding domain
CDDcd000186.30E-271774No hitNo description
PRINTSPR003675.9E-114056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MDSSNHVRNS RGGEVSYRGV RRRPWGKYAA EIRDSNNQGV RVWLGTFDTA LEAARAYDQA  60
AYNMRGAMAV LNFPKEYKLT PNGAVNNNAA SSSGPGRTKE VIEFECLDDQ VLEDMLAWDD  120
GPNGFGHVYS RGVQNPVRTA K*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-241774663ATERF1
3gcc_A7e-241774663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009621246.12e-40PREDICTED: ethylene-responsive transcription factor ERF098-like
RefseqXP_016440397.12e-40PREDICTED: ethylene-responsive transcription factor ERF098-like
SwissprotQ9LSX02e-34ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLA0A0L9TU948e-40A0A0L9TU94_PHAAN; Uncharacterized protein
STRINGGLYMA20G34560.14e-39(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.17e-35ERF family protein